Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
K7F1Q6_PELSIUncharacterized protein. (618 aa)    
Predicted Functional Partners:
PDYN
Prodynorphin.
      
 0.622
MSX2
Msh homeobox 2.
      
 0.542
MAB21L2
Mab-21 like 2.
      
 0.541
MAB21L1
Mab-21 like 1.
      
 0.541
AMOT
Angiomotin.
    
 0.539
AMOTL1
Angiomotin like 1.
    
 0.539
MAMLD1
Mastermind like domain containing 1.
    
 0.539
LOC102454899
Protein S100; Belongs to the S-100 family.
   
  
 0.536
LOC106732620
Protein S100; Belongs to the S-100 family.
   
  
 0.536
LOC102462333
Protein S100; Belongs to the S-100 family.
   
  
 0.536
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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