Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC28DnaJ heat shock protein family (Hsp40) member C28. (378 aa)    
Predicted Functional Partners:
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
    
   0.878
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.687
LOC102444558
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.687
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
      
 0.679
DNAJC16
DnaJ heat shock protein family (Hsp40) member C16.
      
 0.664
DNAJC9
DnaJ heat shock protein family (Hsp40) member C9.
      
 0.635
DNAJC14
J domain-containing protein.
      
 0.602
TMEM50B
Transmembrane protein 50B.
      
 0.601
DNAJC24
DnaJ heat shock protein family (Hsp40) member C24.
      
 0.593
DNAJC27
DnaJ heat shock protein family (Hsp40) member C27.
      
 0.580
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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