STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K7F1S4_PELSIUncharacterized protein. (27 aa)    
Predicted Functional Partners:
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 0.963
GFER
Sulfhydryl oxidase.
   
 0.752
PUM2
Pumilio RNA binding family member 2.
    
 
 0.748
PUM1
Pumilio RNA binding family member 1.
    
 
 0.748
COA5
Cytochrome c oxidase assembly factor 5.
   
  
 0.717
TIMM8B
Translocase of inner mitochondrial membrane 8 homolog B; Belongs to the small Tim family.
   
 
 0.707
ATOX1
HMA domain-containing protein.
   
 
 0.700
COX11
Cytochrome c oxidase copper chaperone COX11.
   
  
 0.692
CCS
Copper chaperone for superoxide dismutase.
    
 0.688
SLC31A1
Solute carrier family 31 member 1.
   
  
 0.676
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.