STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RANBP3RAN binding protein 3. (568 aa)    
Predicted Functional Partners:
RCC1
Regulator of chromosome condensation 1.
    
 
 0.831
NUP214
Nucleoporin 214.
     
 0.779
KPNA4
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.779
XPO1
Exportin 1.
    
 
 0.769
IPO5
Importin 5.
   
  
 0.663
NXT2
Nuclear transport factor 2 like export factor 2.
     
 0.662
NUP50
Nucleoporin 50.
     
 0.660
NUP62
Nucleoporin 62.
   
 
 0.639
K7EXF7_PELSI
Uncharacterized protein.
   
 0.633
XPO7
Exportin 7.
    
 
 0.629
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.