STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACE1Beta-secretase 1; Belongs to the peptidase A1 family. (359 aa)    
Predicted Functional Partners:
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.715
APLP2
Amyloid beta precursor like protein 2.
    
 0.644
APLP1
Amyloid beta precursor like protein 1.
    
 0.516
IDE
Insulin degrading enzyme; Belongs to the peptidase M16 family.
     
 0.422
PCSK4
Proprotein convertase subtilisin/kexin type 4.
   
 0.421
ATP6AP2
ATPase H+ transporting accessory protein 2.
   
 0.401
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.