STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USE1Unconventional SNARE in the ER 1. (218 aa)    
Predicted Functional Partners:
STX18
Syntaxin 18.
   
 0.999
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 0.993
K7F8R5_PELSI
Protein kinase domain-containing protein.
    
 0.980
SNX15
Sorting nexin 15.
    
 0.980
RPS6KC1
PX domain-containing protein.
    
 0.980
RINT1
RAD50 interactor 1.
    
 0.978
ZW10
Zw10 kinetochore protein.
    
 0.972
LOC102460660
Uncharacterized protein.
    
 0.953
LOC102447801
Uncharacterized protein.
    
 0.950
BNIP1
BCL2 interacting protein 1.
    
 0.946
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.