Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COG4Component of oligomeric golgi complex 4. (699 aa)    
Predicted Functional Partners:
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.999
COG7
Component of oligomeric golgi complex 7.
   
 0.999
COG3
Component of oligomeric golgi complex 3.
   
 0.999
COG8
Uncharacterized protein.
   
 0.999
COG5
Component of oligomeric golgi complex 5.
   
 0.999
COG2
Component of oligomeric golgi complex 2.
   
 0.999
COG1
Component of oligomeric golgi complex 1.
   
 0.999
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
     
 0.965
STX16
t-SNARE coiled-coil homology domain-containing protein.
     
 0.963
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 0.960
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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