STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102449524LRRCT domain-containing protein. (559 aa)    
Predicted Functional Partners:
NXPH3
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.467
K7F0M8_PELSI
C1q domain-containing protein.
  
  
  0.442
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.433
K7G5D2_PELSI
B30.2/SPRY domain-containing protein.
  
     0.423
K7F681_PELSI
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
     0.410
PHYHIP
Phytanoyl-CoA 2-hydroxylase interacting protein.
  
    0.406
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.