STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALUCalumenin. (317 aa)    
Predicted Functional Partners:
COPZ2
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
 
 0.585
TIMP3
TIMP metallopeptidase inhibitor 3.
     
 0.553
CALR
Calreticulin.
   
 
 0.553
FKBP10
Peptidylprolyl isomerase.
   
 
 0.518
LOX
Lysyl oxidase.
   
  
 0.515
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.499
S100Z
Protein S100; Belongs to the S-100 family.
     
 0.469
EFEMP2
EGF containing fibulin extracellular matrix protein 2.
   
 
 0.467
LTBP2
Latent transforming growth factor beta binding protein 2.
   
  
 0.463
PTGIS
Prostaglandin I2 synthase; Belongs to the cytochrome P450 family.
      
 0.461
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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