STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALN1Calneuron 1. (255 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.705
WDR90
WD repeat domain 90.
   
 0.542
NEURL1B
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.517
K7FN42_PELSI
ANK_REP_REGION domain-containing protein.
    
 0.471
RCVRN
Recoverin.
    
 0.464
TNNI1
Troponin I1, slow skeletal type.
   
 0.463
TNNI2
Troponin I2, fast skeletal type.
   
 0.463
NCS1
Neuronal calcium sensor 1.
    
 0.455
DCLK1
Uncharacterized protein.
   
 0.448
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.447
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.