STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC18B1Solute carrier family 18 member B1. (459 aa)    
Predicted Functional Partners:
CTCF
CCCTC-binding factor.
      
 0.755
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
     
 0.753
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.712
PANX1
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.559
PANX2
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.558
SLC3A2
Solute carrier family 3 member 2.
      
 0.551
SLC10A4
Solute carrier family 10 member 4.
      
 0.548
AMD1
S-adenosylmethionine decarboxylase proenzyme.
      
 0.473
SLC16A1
Solute carrier family 16 member 1.
      
 0.456
SLC17A5
Solute carrier family 17 member 5.
      
 0.450
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.