STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGBL1Integrin subunit beta like 1. (389 aa)    
Predicted Functional Partners:
TNS3
Tensin 3.
   
 0.679
TNS1
Uncharacterized protein.
   
 0.679
K7G3W3_PELSI
PTB domain-containing protein.
   
 0.679
TNS2
Tensin 2.
   
 0.679
ILK
Integrin linked kinase.
    
 0.614
VCL
Vinculin.
   
 0.598
TLNRD1
Talin rod domain containing 1.
   
 0.567
TLN2
Talin 2.
   
 0.567
SH3RF3
SH3 domain containing ring finger 3.
   
 
 0.532
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
   
 0.506
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.