Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATM | ATMIN | ENSPSIP00000006822 | ENSPSIP00000004100 | Non-specific serine/threonine protein kinase. | ATM interactor. | 0.698 |
ATM | CHEK2 | ENSPSIP00000006822 | ENSPSIP00000018260 | Non-specific serine/threonine protein kinase. | Checkpoint kinase 2. | 0.995 |
ATMIN | ATM | ENSPSIP00000004100 | ENSPSIP00000006822 | ATM interactor. | Non-specific serine/threonine protein kinase. | 0.698 |
ATMIN | CHEK2 | ENSPSIP00000004100 | ENSPSIP00000018260 | ATM interactor. | Checkpoint kinase 2. | 0.486 |
ATMIN | DYNLL1 | ENSPSIP00000004100 | ENSPSIP00000015624 | ATM interactor. | Dynein light chain. | 0.465 |
ATMIN | DYNLL2 | ENSPSIP00000004100 | ENSPSIP00000010252 | ATM interactor. | Dynein light chain. | 0.465 |
ATMIN | UBR3 | ENSPSIP00000004100 | ENSPSIP00000002305 | ATM interactor. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.471 |
ATMIN | UBR5 | ENSPSIP00000004100 | ENSPSIP00000015062 | ATM interactor. | Ubiquitin protein ligase E3 component n-recognin 5. | 0.530 |
ATMIN | WRNIP1 | ENSPSIP00000004100 | ENSPSIP00000016759 | ATM interactor. | WRN helicase interacting protein 1. | 0.487 |
CHEK2 | ATM | ENSPSIP00000018260 | ENSPSIP00000006822 | Checkpoint kinase 2. | Non-specific serine/threonine protein kinase. | 0.995 |
CHEK2 | ATMIN | ENSPSIP00000018260 | ENSPSIP00000004100 | Checkpoint kinase 2. | ATM interactor. | 0.486 |
DYNLL1 | ATMIN | ENSPSIP00000015624 | ENSPSIP00000004100 | Dynein light chain. | ATM interactor. | 0.465 |
DYNLL2 | ATMIN | ENSPSIP00000010252 | ENSPSIP00000004100 | Dynein light chain. | ATM interactor. | 0.465 |
UBR3 | ATMIN | ENSPSIP00000002305 | ENSPSIP00000004100 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | ATM interactor. | 0.471 |
UBR5 | ATMIN | ENSPSIP00000015062 | ENSPSIP00000004100 | Ubiquitin protein ligase E3 component n-recognin 5. | ATM interactor. | 0.530 |
WRNIP1 | ATMIN | ENSPSIP00000016759 | ENSPSIP00000004100 | WRN helicase interacting protein 1. | ATM interactor. | 0.487 |