Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNL2Cyclin L2; Belongs to the cyclin family. (305 aa)    
Predicted Functional Partners:
CCNL1
Cyclin L1; Belongs to the cyclin family.
   
   0.889
CCNA2
Cyclin A2; Belongs to the cyclin family.
      
 0.828
SAP30BP
SAP30 binding protein.
    
   0.792
CCNA1
Cyclin A1; Belongs to the cyclin family.
      
 0.783
CCND1
Cyclin D1; Belongs to the cyclin family.
      
 0.752
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
    
 
 0.734
CLASRP
CLK4 associating serine/arginine rich protein.
   
  
 0.711
CDK10
Cyclin dependent kinase 10; Belongs to the protein kinase superfamily.
   
 
 0.669
K7FBR0_PELSI
Protein kinase domain-containing protein.
   
 
 0.656
CCNE1
Cyclin E1; Belongs to the cyclin family.
    
 
 0.651
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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