STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBKSRibokinase. (252 aa)    
Predicted Functional Partners:
TKT
Transketolase.
  
 0.966
RPIA
Ribose 5-phosphate isomerase A.
    
 0.957
PRPS1
Pribosyltran_N domain-containing protein.
  
 0.943
PRPS2
Phosphoribosyl pyrophosphate synthetase 2.
  
 0.943
DERA
Deoxyribose-phosphate aldolase.
    
 0.942
PGM2
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family.
  
 
 0.941
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
  
 0.772
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.771
MTAP
PNP_UDP_1 domain-containing protein.
   
 0.751
K7G041_PELSI
Uncharacterized protein.
    
 0.741
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.