STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102459928F-box domain-containing protein. (436 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.662
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.587
RBX1
Ring-box 1.
    
 0.485
COMMD4
COMM domain containing 4.
    
 0.485
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.478
CCDC92B
CCDC92 domain-containing protein.
      
 0.469
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.465
CRY2
Cryptochrome circadian regulator 2.
    
 0.453
RNF7
Ring finger protein 7.
    
 0.447
LOC102449437
FAD_binding_7 domain-containing protein.
    
 0.436
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.