STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLX5Distal-less homeobox 5. (290 aa)    
Predicted Functional Partners:
DLX6
Distal-less homeobox 6.
  
 
0.752
BGLAP
Osteocalcin; Binds strongly to apatite and calcium.
      
 0.559
MYF6
Myogenic factor 6.
   
  
 0.541
MSX2
Msh homeobox 2.
   
0.529
RUNX3
Runt-related transcription factor.
   
 
 0.455
RUNX2
Runt-related transcription factor.
   
 
 0.455
RUNX1
Runt-related transcription factor.
   
 
 0.455
PVALB
Parvalbumin; Belongs to the parvalbumin family.
      
 0.453
BMP2
Bone morphogenetic protein 2.
     
 0.443
BMP4
Bone morphogenetic protein 4.
     
 0.443
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.