STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT17Synaptotagmin 17. (375 aa)    
Predicted Functional Partners:
CLEC19A
C-type lectin domain containing 19A.
 
   
 0.811
ITSN2
Intersectin 2.
     
 0.641
NT5DC3
5'-nucleotidase domain containing 3.
      
 0.562
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.551
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
  
 0.490
ITSN1
Intersectin 1.
     
 0.476
MRPL13
Mitochondrial ribosomal protein L13.
      
 0.474
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
     
 0.441
MAB21L3
Mab-21 like 3.
  
    0.418
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.