STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1DUncharacterized protein. (348 aa)    
Predicted Functional Partners:
K7F444_PELSI
SprT-like domain-containing protein.
    
 0.871
HINT1
Histidine triad nucleotide binding protein 1.
    
 0.863
TBP
TATA-box binding protein.
    
 0.831
TBPL2
TATA-box binding protein like 2.
    
 0.747
FHIT
Fragile histidine triad diadenosine triphosphatase.
    
 0.709
HINT3
Histidine triad nucleotide binding protein 3.
    
 0.709
TBPL1
TATA-box binding protein like 1.
    
 0.706
TTF1
Transcription termination factor 1.
     
 0.679
TWISTNB
TWIST neighbor.
    
 0.615
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
     
  0.610
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.