STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF166Ring finger protein 166. (185 aa)    
Predicted Functional Partners:
KLHL28
Kelch like family member 28.
    
 
 0.652
UBE2W
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.610
ZBTB39
Zinc finger and BTB domain containing 39.
    
 0.575
K7FG91_PELSI
Uncharacterized protein.
    
 0.567
K7FKM9_PELSI
Coronin; Belongs to the WD repeat coronin family.
      
 0.564
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
    
 
 0.562
MED13L
Mediator complex subunit 13L.
      
 0.560
ZC3HC1
Zinc finger C3HC-type containing 1.
      
 0.558
ZNF276
Zinc finger protein 276.
    
 0.486
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.479
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.