Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POC1BPOC1 centriolar protein B. (468 aa)    
Predicted Functional Partners:
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.753
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.750
K7FN26_PELSI
CXXC-type domain-containing protein.
    
 0.714
WDR82
WD repeat domain 82.
   
 0.709
KAT2B
Lysine acetyltransferase 2B.
   
 0.687
HCFC2
Host cell factor C2.
    
 0.684
PHF20
PHD finger protein 20.
    
 0.643
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.640
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.634
CFAP20
Cilia and flagella associated protein 20.
   
 
 0.628
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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