STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP1GTP binding protein 1. (679 aa)    
Predicted Functional Partners:
NUDCD3
NudC domain containing 3.
      
 0.587
MARS1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.583
DUT
Deoxyuridine triphosphatase.
   
  
 0.568
UBFD1
Ubiquitin family domain containing 1.
      
 0.563
K7EXR0_PELSI
Uncharacterized protein.
      
 0.561
OXNAD1
Oxidoreductase NAD binding domain containing 1.
      
 0.560
MARS2
Methionyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.554
EIF2S3
Tr-type G domain-containing protein.
    
 
 0.551
NPC1
NPC intracellular cholesterol transporter 1.
   
  
 0.548
EIF5
Eukaryotic translation initiation factor 5.
      
 0.465
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.