Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
PHACTR1Phosphatase and actin regulator. (547 aa)    
Predicted Functional Partners:
HIVEP1
Human immunodeficiency virus type I enhancer binding protein 1.
    
 
 0.709
TTC34
Tetratricopeptide repeat domain 34.
      
 0.630
REEP1
Receptor expression-enhancing protein.
      
 0.601
ARMC8
Armadillo repeat containing 8.
      
 0.598
GFOD1
Glucose-fructose oxidoreductase domain containing 1.
      
 0.572
GFOD2
Glucose-fructose oxidoreductase domain containing 2.
      
 0.572
HOMER2
Homer scaffold protein 2.
    
   0.564
MRTFA
Myocardin related transcription factor A.
   
  
 0.557
MRTFB
Myocardin related transcription factor B.
   
  
 0.557
MYOCD
Phosphatase and actin regulator.
   
  
 0.557
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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