STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN1Sad1 and UNC84 domain containing 1. (931 aa)    
Predicted Functional Partners:
K7G5H8_PELSI
Uncharacterized protein.
    
 0.954
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.881
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
    
 0.838
K7FAU3_PELSI
Uncharacterized protein.
    
 0.757
K7FAZ1_PELSI
Calponin-homology (CH) domain-containing protein.
    
 0.757
TERB1
Telomere repeat binding bouquet formation protein 1.
    
 
 0.673
TMEM201
Uncharacterized protein.
    
 
 0.614
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.613
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
 0.613
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.613
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.