Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCM2Glial cells missing transcription factor 2. (490 aa)    
Predicted Functional Partners:
FHL3
Four and a half LIM domains 3.
   
   0.851
CASR
Calcium sensing receptor.
   
 
 0.841
HSF5
Heat shock transcription factor 5.
   
   0.771
PAX9
Paired box 9.
      
 0.713
FOXN1
Forkhead box N1.
    
 
 0.691
PAX1
Uncharacterized protein.
      
 0.670
FGFRL1
Fibroblast growth factor receptor like 1.
    
 
 0.604
CDC73
Cell division cycle 73.
      
 0.557
FOXI2
Forkhead box I2.
   
 
 0.553
FOXI1
Forkhead box I1.
   
 
 0.553
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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