STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXN4Forkhead box N4. (479 aa)    
Predicted Functional Partners:
RNF26
Ring finger protein 26.
    
 
 0.797
SLC37A4
Solute carrier family 37 member 4.
      
 0.790
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
      
 0.625
VSX1
Visual system homeobox 1.
   
  
 0.579
PTF1A
Pancreas associated transcription factor 1a.
   
 
 0.579
TWIST2
Twist family bHLH transcription factor 2.
   
 
 0.573
CCDC177
Uncharacterized protein.
    
 0.569
VSX2
Visual system homeobox 2.
      
 0.541
ATOH7
Atonal bHLH transcription factor 7.
   
  
 0.468
SIRT1
Deacetylase sirtuin-type domain-containing protein.
    
 0.463
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.