STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN2LAtaxin 2 like. (1013 aa)    
Predicted Functional Partners:
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.736
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.656
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.653
RC3H2
Ring finger and CCCH-type domains 2.
    
 
 0.613
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
    
 
 0.599
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
  
   
 0.592
HELZ
Helicase with zinc finger.
   
 
 0.591
ALS2CL
ALS2 C-terminal like.
    
 
 0.591
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.581
PABPC1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.567
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.