Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NUDT4Nudix hydrolase domain-containing protein. (128 aa)    
Predicted Functional Partners:
NUDT1
Nudix hydrolase 1; Belongs to the Nudix hydrolase family.
    
 
 0.702
STYXL1
Serine/threonine/tyrosine interacting like 1.
      
 0.667
UHMK1
U2AF homology motif kinase 1.
      
 0.636
NUDT22
Nudix hydrolase 22.
      
 0.601
NUDT18
Nudix hydrolase 18.
      
 0.599
METTL1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
     
 0.568
F2RL3
F2R like thrombin or trypsin receptor 3.
      
 0.556
UXS1
UDP-glucuronate decarboxylase 1.
      
 0.556
WDR4
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
      
 0.556
ITPK1
Inositol-tetrakisphosphate 1-kinase.
    
 
 0.545
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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