STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR153G protein-coupled receptor 153. (614 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.645
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
   
 0.517
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.512
USP32
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
 0.498
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.474
LSM10
LSM10, U7 small nuclear RNA associated.
   
 0.465
FAM162B
Family with sequence similarity 162 member B.
    
 
 0.456
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.456
EIF2S3
Tr-type G domain-containing protein.
   
 0.455
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.450
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.