STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102447214ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (715 aa)    
Predicted Functional Partners:
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
    
 
 0.487
CALM1
Calmodulin 1; Belongs to the calmodulin family.
    
 
 0.487
EFCAB3
EF-hand calcium binding domain 3.
    
 
 0.487
CALM3
Calmodulin 3; Belongs to the calmodulin family.
    
 
 0.487
LOC102456219
Uncharacterized protein; Belongs to the calmodulin family.
    
 
 0.487
CALM2
Uncharacterized protein; Belongs to the calmodulin family.
    
 
 0.487
LOC102452499
Uncharacterized protein; Belongs to the calmodulin family.
    
 
 0.487
LYPD6
LY6/PLAUR domain containing 6.
      
 0.472
TRPM2
Transient receptor potential cation channel subfamily M member 2.
     
 0.427
TRPC1
Transient receptor potential cation channel subfamily C member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.411
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.