STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC32A1Solute carrier family 32 member 1. (521 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.965
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.707
GAD2
Glutamate decarboxylase 2.
   
 
 0.666
GAD1
Glutamate decarboxylase 1.
   
 
 0.646
LOC102462455
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.581
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.570
VAMP1
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.570
GPHN
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
      
 0.531
SLC18A3
Solute carrier family 18 member A3.
      
 0.523
SYT2
Uncharacterized protein.
   
 
 0.512
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.