Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF341Uncharacterized protein. (607 aa)    
Predicted Functional Partners:
K7FDR2_PELSI
C2H2-type domain-containing protein.
 
     0.916
CARMIL1
Capping protein regulator and myosin 1 linker 1.
      
 0.601
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 
 0.539
TCERG1L
Transcription elongation regulator 1 like.
    
 
 0.425
ZFAND3
Zinc finger AN1-type containing 3.
      
 0.423
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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