STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K7FED2_PELSIUncharacterized protein. (476 aa)    
Predicted Functional Partners:
PLAT
Plasminogen activator; Belongs to the peptidase S1 family.
    
  0.694
MAPT
Microtubule-associated protein.
    
   0.689
CD47
CD47 molecule.
   
 0.610
K7FKI3_PELSI
IG domain-containing protein.
   
 0.560
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 
 0.556
UBC
Uncharacterized protein.
    
  0.554
TFPI
Tissue factor pathway inhibitor.
    
  0.550
K7G041_PELSI
Uncharacterized protein.
   
   0.545
MRRF
Mitochondrial ribosome recycling factor.
    
   0.543
TDRD3
Tudor domain containing 3.
    
   0.543
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.