STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMK1LIM domain kinase 1. (517 aa)    
Predicted Functional Partners:
CFL1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
   
 0.936
CFL2
Cofilin 2; Belongs to the actin-binding proteins ADF family.
   
 0.840
DSTN
Destrin, actin depolymerizing factor; Belongs to the actin-binding proteins ADF family.
   
 0.774
CDC42
Cell division cycle 42.
   
 0.708
SSH3
Slingshot protein phosphatase 3.
   
 0.671
PAK1
Non-specific serine/threonine protein kinase.
    
0.662
PAK3
Non-specific serine/threonine protein kinase.
    
0.662
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
    
 0.659
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
    
 0.659
PAK2
Non-specific serine/threonine protein kinase.
    
0.632
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.