STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A7Solute carrier family 38 member 7. (460 aa)    
Predicted Functional Partners:
GAD2
Glutamate decarboxylase 2.
     
 0.596
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.562
COPS7A
COP9 signalosome subunit 7A.
      
 0.562
RRAGB
Ras related GTP binding B.
   
 0.557
YIPF1
Protein YIPF.
      
 0.552
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.550
SLC38A9
Solute carrier family 38 member 9.
      
 0.545
YIPF3
Yip1 domain family member 3.
      
 0.544
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.533
LAMTOR5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.492
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.