STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT1FAT atypical cadherin 1. (4655 aa)    
Predicted Functional Partners:
SLC36A1
Solute carrier family 36 member 1.
      
 0.732
HEPHL1
Hephaestin like 1; Belongs to the multicopper oxidase family.
      
 0.696
NPHS2
NPHS2 stomatin family member, podocin.
    
 
 0.590
NPHS1
NPHS1 adhesion molecule, nephrin.
   
  
 0.577
CTNNB1
Uncharacterized protein.
    
 
 0.570
FJX1
Uncharacterized protein.
   
 
 0.565
LIX1L
Limb and CNS expressed 1 like.
   
 0.469
LIX1
Limb and CNS expressed 1.
   
 0.469
DRD2
Dopamine receptor D2; Belongs to the G-protein coupled receptor 1 family.
      
 0.462
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.434
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.