STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FANK1Fibronectin type III and ankyrin repeat domains 1. (211 aa)    
Predicted Functional Partners:
CDKN2C
Cyclin dependent kinase inhibitor 2C.
  
     0.522
MTPN
Myotrophin.
  
 
   0.510
ITPK1
Inositol-tetrakisphosphate 1-kinase.
    
 0.500
COPS5
COP9 signalosome subunit 5.
    
 0.470
ANKRD53
Ankyrin repeat domain 53.
  
 
  0.458
ASB16
Ankyrin repeat and SOCS box containing 16.
  
     0.436
SPATA4
Spermatogenesis associated 4.
   
 
 0.435
IFT81
Intraflagellar transport 81.
    
 0.419
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.