STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YRDCYrdC N6-threonylcarbamoyltransferase domain containing. (284 aa)    
Predicted Functional Partners:
OSGEPL1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
  
 
 0.949
PUDP
Pseudouridine 5'-phosphatase.
  
 
  0.837
HEMK1
HemK methyltransferase family member 1.
  
  
 0.740
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.738
YARS1
Tyrosine--tRNA ligase.
     
 0.714
TRIT1
tRNA isopentenyltransferase 1.
     
 0.697
K7EWF8_PELSI
Uncharacterized protein.
  
  
 0.692
GTPBP3
GTP binding protein 3, mitochondrial.
     
 0.687
TP53RK
TP53 regulating kinase.
   
  
 0.674
MTFMT
Mitochondrial methionyl-tRNA formyltransferase.
  
  
 0.667
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.