STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN6UBX domain protein 6. (387 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
 
 0.998
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.996
UBXN4
UBX domain-containing protein.
    
 0.996
NSFL1C
NSFL1 cofactor.
    
 0.995
UBXN2A
UBX domain protein 2A.
    
 0.974
UBXN1
UBX domain protein 1.
   
 0.973
UBXN10
UBX domain protein 10.
    
 
 0.961
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
   
 
0.950
FAF1
Fas associated factor 1.
    
 
 0.949
K7FMD5_PELSI
Uncharacterized protein.
    
 
 0.903
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.