STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP6La ribonucleoprotein domain family member 6. (332 aa)    
Predicted Functional Partners:
STRAP
Serine/threonine kinase receptor associated protein.
    
 
 0.698
GMNC
Geminin coiled-coil domain containing.
      
 0.568
MAB21L3
Mab-21 like 3.
      
 0.565
LYPLAL1
Lysophospholipase like 1.
      
 0.564
TM2D3
TM2 domain containing 3.
      
 0.528
PEX5
Peroxisomal biogenesis factor 5.
      
 0.473
PEX5L
Peroxisomal biogenesis factor 5 like.
      
 0.473
TTC25
Tetratricopeptide repeat domain 25.
      
 0.473
RNF6
Ring finger protein 6.
      
 0.473
MCEE
Methylmalonyl-CoA epimerase.
      
 0.473
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.