STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASP8AP2Uncharacterized protein. (980 aa)    
Predicted Functional Partners:
LSM11
LSM11, U7 small nuclear RNA associated.
      
 0.564
NPAT
Nuclear protein, coactivator of histone transcription.
   
 
 0.553
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.463
SUMO1
Small ubiquitin-related modifier.
    
  0.447
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.442
PIAS4
Protein inhibitor of activated STAT 4.
    
  0.429
GINS2
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
      
 0.428
CPSF3
Cleavage and polyadenylation specific factor 3.
      
 0.420
CBX4
Chromobox 4.
     
 0.418
CBX8
Chromobox 8.
     
 0.418
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.