STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPACA9Sperm acrosome associated 9. (223 aa)    
Predicted Functional Partners:
C5orf49
Chromosome 5 open reading frame 49.
    
 
 0.647
CFAP77
Cilia and flagella associated protein 77.
   
 
 0.630
EFHC1
EF-hand domain containing 1.
   
   0.593
CCDC173
Uncharacterized protein.
    
 
 0.591
ANKRD29
Ankyrin repeat domain 29.
    
 
 0.580
C9orf116
Chromosome 9 open reading frame 116.
   
   0.570
CFAP45
Cilia and flagella associated protein 45.
   
   0.569
EFHC2
EF-hand domain containing 2.
   
   0.569
CUNH1orf194
Uncharacterized protein.
   
   0.569
CFAP126
Cilia and flagella associated protein 126.
   
   0.568
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.