STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL3RAB, member of RAS oncogene family like 3. (236 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
    
 0.581
GTF2E1
General transcription factor IIE subunit 1.
   
  
 0.574
RAB3IP
Sec2p domain-containing protein.
      
 0.567
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
      
 0.559
HSPA9
Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.
  
 0.559
RABL6
RAB, member RAS oncogene family like 6.
      
 0.553
SPRYD3
SPRY domain containing 3.
      
 0.550
HSPH1
Heat shock protein family H (Hsp110) member 1.
  
 0.526
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
  
 0.526
HSPA4
Heat shock protein family A (Hsp70) member 4.
  
 0.526
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.