STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKDD1BAnkyrin repeat and death domain containing 1B. (524 aa)    
Predicted Functional Partners:
RNF146
Ring finger protein 146.
    
 0.701
AXIN1
Axin 1.
    
 0.651
AXIN2
Axin 2.
    
 0.651
SPTBN2
Spectrin beta chain; Belongs to the spectrin family.
   
 0.578
SPTB
PH domain-containing protein.
   
 0.578
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
   
 0.578
SPTBN5
Uncharacterized protein.
   
 0.578
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.533
CHL1
Cell adhesion molecule L1 like.
    
 0.480
LOC102448806
Uncharacterized protein.
    
 0.480
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.