STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCF2MCF.2 cell line derived transforming sequence. (1071 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.860
RHOC
Uncharacterized protein.
    
 0.703
RHOB
Ras homolog family member B.
    
 0.703
RHOA
Uncharacterized protein.
    
 0.703
RHOG
Ras homolog family member G.
    
 0.569
LOC102456623
Uncharacterized protein.
    
 0.569
GNA13
G protein subunit alpha 13.
    
 0.483
EZR
Ezrin.
    
 
 0.481
RND1
Rho family GTPase 1.
    
 0.479
RND3
Rho family GTPase 3.
    
 0.479
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.