STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRPAP1LDL receptor related protein associated protein 1. (351 aa)    
Predicted Functional Partners:
SORL1
Sortilin related receptor 1.
    
 
 0.716
SORT1
Sortilin.
    
 
 0.590
MESD
Mesoderm development LRP chaperone.
   
 
 0.568
SMIM14
Small integral membrane protein 14.
      
 0.566
RAPGEF4
Rap guanine nucleotide exchange factor 4.
      
 0.566
RCC1L
RCC1 like.
      
 0.564
K7FQ39_PELSI
Uncharacterized protein.
      
 0.560
RAPGEF3
Rap guanine nucleotide exchange factor 3.
      
 0.559
ZNF644
Zinc finger protein 644.
      
 0.539
LRP1B
LDL receptor related protein 1B.
    
 
 0.524
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.