STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K7GD29_PELSIUncharacterized protein. (1489 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.582
RNF2
Ring finger protein 2.
    
 0.561
LTF
Lactotransferrin; Belongs to the transferrin family.
   
 
 0.505
PPA1
Pyrophosphatase (inorganic) 1.
      
 0.503
CBX4
Chromobox 4.
    
 0.497
IRS4
Insulin receptor substrate 4.
     
 0.489
BANF1
Barrier to autointegration factor 1.
      
 0.488
CBX2
Chromobox 2.
    
 0.486
BMI1
RING-type domain-containing protein.
    
 0.483
PCGF2
Polycomb group ring finger 2.
    
 0.483
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.