STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYRTyrosinase; This is a copper-containing oxidase that functions in the formation of pigments such as melanins and other polyphenolic compounds. (529 aa)    
Predicted Functional Partners:
DDC
Dopa decarboxylase.
    
 0.921
LOC102454164
Amino_oxidase domain-containing protein.
   
 0.919
TH
Tyrosine hydroxylase.
     
 0.918
LOC102446096
BH4_AAA_HYDROXYL_2 domain-containing protein.
     
 0.918
LOC102456958
Amine oxidase.
   
 0.917
TPO
Thyroid peroxidase.
     
 0.911
K7FDJ2_PELSI
Amino_oxidase domain-containing protein.
   
  0.909
K7GEZ0_PELSI
Amine oxidase.
    
 0.909
LOC102461938
Amino_oxidase domain-containing protein.
    
 0.908
GOT2
Aspartate aminotransferase.
    
 0.904
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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