STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO1Cysteine dioxygenase. (165 aa)    
Predicted Functional Partners:
CTH
Cystathionine gamma-lyase.
     
 0.962
GADL1
Glutamate decarboxylase like 1.
     
 0.944
CSAD
Cysteine sulfinic acid decarboxylase.
     
 0.944
GAD1
Glutamate decarboxylase 1.
     
 0.935
K7GGX5_PELSI
Uncharacterized protein.
     
 0.934
GAD2
Glutamate decarboxylase 2.
     
 0.934
GOT2
Aspartate aminotransferase.
     
 0.927
GOT1
Aspartate aminotransferase.
     
 0.923
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
     
 0.923
KYAT3
Kynurenine aminotransferase 3.
     
 0.900
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.