STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102460485Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa)    
Predicted Functional Partners:
BECN1
Uncharacterized protein.
   
 0.914
LOC102455709
Uncharacterized protein.
 
  
   0.548
DCLK1
Uncharacterized protein.
 
  
 
 0.470
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
   
 0.456
CALM1
Calmodulin 1; Belongs to the calmodulin family.
   
 0.456
EFCAB3
EF-hand calcium binding domain 3.
   
 0.456
CALM3
Calmodulin 3; Belongs to the calmodulin family.
   
 0.456
LOC102456219
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.456
CALM2
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.456
LOC102452499
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.456
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.